STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
asm-3Sphingomyelin phosphodiesterase; Converts sphingomyelin to ceramide. Belongs to the acid sphingomyelinase family. (617 aa)    
Predicted Functional Partners:
css1
Inositol phosphosphingolipids phospholipase C.
     
 0.919
GCS1_1
Ceramide glucosyltransferase.
     
 0.915
Hypma_012203
Neutral ceramidase.
     
 0.913
DES1
Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides.
     
 0.905
Vha68-2
V-type proton ATPase catalytic subunit A.
 
      0.796
neg-1_0
Endo-1,6-beta-D-glucanase; Belongs to the glycosyl hydrolase 30 family.
   
 
 0.564
neg-1_1
Endo-1,6-beta-D-glucanase; Belongs to the glycosyl hydrolase 30 family.
   
 
 0.564
lcb4
Sphingoid long chain base kinase 4.
    
 0.532
ACER3
Alkaline ceramidase 3.
     
 0.529
YSR3
Dihydrosphingosine 1-phosphate phosphatase YSR3.
     
 0.511
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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