STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_013957Periodic tryptophan protein 2. (874 aa)    
Predicted Functional Partners:
Hypma_010752
U3 small nucleolar RNA-associated protein 21.
   
 0.999
UTP10
U3 small nucleolar RNA-associated protein 10.
   
 0.999
Hypma_008046
Uncharacterized protein.
   
 0.999
Hypma_004322
Putative U3 small nucleolar RNA-associated protein 18.
   
 0.999
WDR75
WD repeat-containing protein 75.
   
 0.999
nol6
U3 small nucleolar RNA-associated protein 22.
   
 0.999
utp4
U3 small nucleolar RNA-associated protein 4.
   
 0.999
UTP5
U3 small nucleolar RNA-associated protein 5.
   
 0.999
utp13
Putative U3 small nucleolar RNA-associated protein 13.
  
0.999
utp15
U3 small nucleolar RNA-associated protein 15.
   
0.998
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.