STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nxt3Putative G3BP-like protein. (514 aa)    
Predicted Functional Partners:
ubp3
Ubiquitin carboxyl-terminal hydrolase.
   
 
 0.988
NAM8
Protein NAM8.
   
 
 0.848
Hypma_002114
Putative RNA-binding protein C23E6.01c.
   
 
 0.848
Hypma_006569
Uncharacterized protein C21B10.03c.
   
 
 0.713
cpc-2
Guanine nucleotide-binding protein subunit beta-like protein.
   
 
 0.692
Hypma_010510
Protein mago nashi.
    
 0.659
mex67
mRNA export factor mex67.
    
 0.658
Pum2
Pumilio 2.
   
 
 0.646
ABCE2
ABC transporter E family member 2.
   
 
 0.608
SPBC4B4.04
Eukaryotic translation initiation factor 2A; Functions in the early steps of protein synthesis of a small number of specific mRNAs. Acts by directing the binding of methionyl- tRNAi to 40S ribosomal subunits. In contrast to the eIF-2 complex, it binds methionyl-tRNAi to 40S subunits in a codon-dependent manner, whereas the eIF-2 complex binds methionyl-tRNAi to 40S subunits in a GTP-dependent manner.
    
 
 0.596
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.