Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Pmen_0005 | Pmen_0006 | PFAM: phosphatidate cytidylyltransferase. | PFAM: phospholipid/glycerol acyltransferase. | 0.994 |
Pmen_0005 | Pmen_0007 | PFAM: phosphatidate cytidylyltransferase. | Hypothetical protein. | 0.878 |
Pmen_0005 | Pmen_0008 | PFAM: phosphatidate cytidylyltransferase. | PFAM: phosphoesterase, PA-phosphatase related; Dual specificity protein phosphatase. | 0.972 |
Pmen_0005 | Pmen_0009 | PFAM: phosphatidate cytidylyltransferase. | PFAM: alpha/beta hydrolase fold. | 0.978 |
Pmen_0005 | Pmen_0010 | PFAM: phosphatidate cytidylyltransferase. | PFAM: CDP-alcohol phosphatidyltransferase. | 0.998 |
Pmen_0005 | Pmen_0011 | PFAM: phosphatidate cytidylyltransferase. | PFAM: phospholipid/glycerol acyltransferase. | 0.948 |
Pmen_0005 | Pmen_0012 | PFAM: phosphatidate cytidylyltransferase. | D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase, central region. | 0.462 |
Pmen_0005 | Pmen_1521 | PFAM: phosphatidate cytidylyltransferase. | Dual specificity protein phosphatase. | 0.584 |
Pmen_0006 | Pmen_0005 | PFAM: phospholipid/glycerol acyltransferase. | PFAM: phosphatidate cytidylyltransferase. | 0.994 |
Pmen_0006 | Pmen_0007 | PFAM: phospholipid/glycerol acyltransferase. | Hypothetical protein. | 0.873 |
Pmen_0006 | Pmen_0008 | PFAM: phospholipid/glycerol acyltransferase. | PFAM: phosphoesterase, PA-phosphatase related; Dual specificity protein phosphatase. | 0.957 |
Pmen_0006 | Pmen_0009 | PFAM: phospholipid/glycerol acyltransferase. | PFAM: alpha/beta hydrolase fold. | 0.983 |
Pmen_0006 | Pmen_0010 | PFAM: phospholipid/glycerol acyltransferase. | PFAM: CDP-alcohol phosphatidyltransferase. | 0.949 |
Pmen_0006 | Pmen_0011 | PFAM: phospholipid/glycerol acyltransferase. | PFAM: phospholipid/glycerol acyltransferase. | 0.469 |
Pmen_0006 | Pmen_0012 | PFAM: phospholipid/glycerol acyltransferase. | D-alpha,beta-D-heptose 1,7-bisphosphate phosphatase; TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase, central region. | 0.463 |
Pmen_0007 | Pmen_0005 | Hypothetical protein. | PFAM: phosphatidate cytidylyltransferase. | 0.878 |
Pmen_0007 | Pmen_0006 | Hypothetical protein. | PFAM: phospholipid/glycerol acyltransferase. | 0.873 |
Pmen_0007 | Pmen_0008 | Hypothetical protein. | PFAM: phosphoesterase, PA-phosphatase related; Dual specificity protein phosphatase. | 0.915 |
Pmen_0007 | Pmen_0009 | Hypothetical protein. | PFAM: alpha/beta hydrolase fold. | 0.913 |
Pmen_0007 | Pmen_0010 | Hypothetical protein. | PFAM: CDP-alcohol phosphatidyltransferase. | 0.778 |
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