Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pmen_0937 | Pmen_1487 | Pmen_0937 | Pmen_1487 | Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.714 |
Pmen_0937 | Pmen_2549 | Pmen_0937 | Pmen_2549 | Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.928 |
Pmen_1486 | Pmen_1487 | Pmen_1486 | Pmen_1487 | Hypothetical protein. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.695 |
Pmen_1486 | Pmen_1488 | Pmen_1486 | Pmen_1488 | Hypothetical protein. | Hypothetical protein. | 0.695 |
Pmen_1486 | rapA | Pmen_1486 | Pmen_1485 | Hypothetical protein. | SNF2-related protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.568 |
Pmen_1487 | Pmen_0937 | Pmen_1487 | Pmen_0937 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.714 |
Pmen_1487 | Pmen_1486 | Pmen_1487 | Pmen_1486 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Hypothetical protein. | 0.695 |
Pmen_1487 | Pmen_1488 | Pmen_1487 | Pmen_1488 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Hypothetical protein. | 0.800 |
Pmen_1487 | Pmen_1489 | Pmen_1487 | Pmen_1489 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Hypothetical protein. | 0.508 |
Pmen_1487 | Pmen_1591 | Pmen_1487 | Pmen_1591 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | 0.633 |
Pmen_1487 | Pmen_1888 | Pmen_1487 | Pmen_1888 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | PFAM: HhH-GPD family protein; AlkA domain protein. | 0.615 |
Pmen_1487 | Pmen_2549 | Pmen_1487 | Pmen_2549 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | Ketopantoate reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.714 |
Pmen_1487 | rapA | Pmen_1487 | Pmen_1485 | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | SNF2-related protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.507 |
Pmen_1488 | Pmen_1486 | Pmen_1488 | Pmen_1486 | Hypothetical protein. | Hypothetical protein. | 0.695 |
Pmen_1488 | Pmen_1487 | Pmen_1488 | Pmen_1487 | Hypothetical protein. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.800 |
Pmen_1488 | Pmen_1489 | Pmen_1488 | Pmen_1489 | Hypothetical protein. | Hypothetical protein. | 0.492 |
Pmen_1488 | rapA | Pmen_1488 | Pmen_1485 | Hypothetical protein. | SNF2-related protein; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.507 |
Pmen_1489 | Pmen_1487 | Pmen_1489 | Pmen_1487 | Hypothetical protein. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.508 |
Pmen_1489 | Pmen_1488 | Pmen_1489 | Pmen_1488 | Hypothetical protein. | Hypothetical protein. | 0.492 |
Pmen_1591 | Pmen_1487 | Pmen_1591 | Pmen_1487 | Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine. | DNA-N1-methyladenine dioxygenase; PFAM: 2OG-Fe(II) oxygenase. | 0.633 |
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