Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pmen_3405 | Pmen_3407 | Pmen_3405 | Pmen_3407 | Lysophospholipase L1 and related esterase-like protein. | PFAM: protein of unknown function DUF1289. | 0.747 |
Pmen_3405 | Pmen_3408 | Pmen_3405 | Pmen_3408 | Lysophospholipase L1 and related esterase-like protein. | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | 0.747 |
Pmen_3405 | Pmen_3409 | Pmen_3405 | Pmen_3409 | Lysophospholipase L1 and related esterase-like protein. | PFAM: NUDIX hydrolase. | 0.738 |
Pmen_3405 | Pmen_3410 | Pmen_3405 | Pmen_3410 | Lysophospholipase L1 and related esterase-like protein. | PFAM: NUDIX hydrolase. | 0.535 |
Pmen_3405 | birA | Pmen_3405 | Pmen_3926 | Lysophospholipase L1 and related esterase-like protein. | biotin--acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon. | 0.408 |
Pmen_3405 | purT | Pmen_3405 | Pmen_3406 | Lysophospholipase L1 and related esterase-like protein. | Formate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.800 |
Pmen_3407 | Pmen_3405 | Pmen_3407 | Pmen_3405 | PFAM: protein of unknown function DUF1289. | Lysophospholipase L1 and related esterase-like protein. | 0.747 |
Pmen_3407 | Pmen_3408 | Pmen_3407 | Pmen_3408 | PFAM: protein of unknown function DUF1289. | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | 0.832 |
Pmen_3407 | Pmen_3409 | Pmen_3407 | Pmen_3409 | PFAM: protein of unknown function DUF1289. | PFAM: NUDIX hydrolase. | 0.792 |
Pmen_3407 | Pmen_3410 | Pmen_3407 | Pmen_3410 | PFAM: protein of unknown function DUF1289. | PFAM: NUDIX hydrolase. | 0.567 |
Pmen_3407 | purT | Pmen_3407 | Pmen_3406 | PFAM: protein of unknown function DUF1289. | Formate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.747 |
Pmen_3408 | Pmen_3405 | Pmen_3408 | Pmen_3405 | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | Lysophospholipase L1 and related esterase-like protein. | 0.747 |
Pmen_3408 | Pmen_3407 | Pmen_3408 | Pmen_3407 | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | PFAM: protein of unknown function DUF1289. | 0.832 |
Pmen_3408 | Pmen_3409 | Pmen_3408 | Pmen_3409 | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | PFAM: NUDIX hydrolase. | 0.806 |
Pmen_3408 | Pmen_3410 | Pmen_3408 | Pmen_3410 | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | PFAM: NUDIX hydrolase. | 0.567 |
Pmen_3408 | purT | Pmen_3408 | Pmen_3406 | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | Formate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family. | 0.747 |
Pmen_3409 | Pmen_3405 | Pmen_3409 | Pmen_3405 | PFAM: NUDIX hydrolase. | Lysophospholipase L1 and related esterase-like protein. | 0.738 |
Pmen_3409 | Pmen_3407 | Pmen_3409 | Pmen_3407 | PFAM: NUDIX hydrolase. | PFAM: protein of unknown function DUF1289. | 0.792 |
Pmen_3409 | Pmen_3408 | Pmen_3409 | Pmen_3408 | PFAM: NUDIX hydrolase. | Carbonic anhydrase/acetyltransferase isoleucine patch superfamily-like protein. | 0.806 |
Pmen_3409 | Pmen_3410 | Pmen_3409 | Pmen_3410 | PFAM: NUDIX hydrolase. | PFAM: NUDIX hydrolase. | 0.693 |
page 1 of 3