node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Pmen_3513 | Pmen_3515 | Pmen_3513 | Pmen_3515 | TIGRFAM: serine O-acetyltransferase. | PFAM: inositol monophosphatase. | 0.618 |
Pmen_3513 | trmJ | Pmen_3513 | Pmen_3514 | TIGRFAM: serine O-acetyltransferase. | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.809 |
Pmen_3515 | Pmen_3513 | Pmen_3515 | Pmen_3513 | PFAM: inositol monophosphatase. | TIGRFAM: serine O-acetyltransferase. | 0.618 |
Pmen_3515 | nusA | Pmen_3515 | Pmen_3609 | PFAM: inositol monophosphatase. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.660 |
Pmen_3515 | nusB | Pmen_3515 | Pmen_3853 | PFAM: inositol monophosphatase. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.748 |
Pmen_3515 | nusG | Pmen_3515 | Pmen_3921 | PFAM: inositol monophosphatase. | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | 0.741 |
Pmen_3515 | rpoA | Pmen_3515 | Pmen_3884 | PFAM: inositol monophosphatase. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.620 |
Pmen_3515 | rpoC | Pmen_3515 | Pmen_3915 | PFAM: inositol monophosphatase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.613 |
Pmen_3515 | rpoZ | Pmen_3515 | Pmen_4389 | PFAM: inositol monophosphatase. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.669 |
Pmen_3515 | rpsD | Pmen_3515 | Pmen_3885 | PFAM: inositol monophosphatase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.630 |
Pmen_3515 | rpsJ | Pmen_3515 | Pmen_3910 | PFAM: inositol monophosphatase. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.685 |
Pmen_3515 | trmJ | Pmen_3515 | Pmen_3514 | PFAM: inositol monophosphatase. | RNA methyltransferase, TrmH family, group 1; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA. | 0.649 |
nusA | Pmen_3515 | Pmen_3609 | Pmen_3515 | NusA antitermination factor; Participates in both transcription termination and antitermination. | PFAM: inositol monophosphatase. | 0.660 |
nusA | nusB | Pmen_3609 | Pmen_3853 | NusA antitermination factor; Participates in both transcription termination and antitermination. | NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons. | 0.875 |
nusA | nusG | Pmen_3609 | Pmen_3921 | NusA antitermination factor; Participates in both transcription termination and antitermination. | Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination. | 0.987 |
nusA | rpoA | Pmen_3609 | Pmen_3884 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
nusA | rpoC | Pmen_3609 | Pmen_3915 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.984 |
nusA | rpoZ | Pmen_3609 | Pmen_4389 | NusA antitermination factor; Participates in both transcription termination and antitermination. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.899 |
nusA | rpsD | Pmen_3609 | Pmen_3885 | NusA antitermination factor; Participates in both transcription termination and antitermination. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.948 |
nusA | rpsJ | Pmen_3609 | Pmen_3910 | NusA antitermination factor; Participates in both transcription termination and antitermination. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.974 |