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Spro_3580 protein (Serratia proteamaculans) - STRING interaction network
"Spro_3580" - PFAM: major facilitator superfamily MFS_1 in Serratia proteamaculans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_3580PFAM- major facilitator superfamily MFS_1; KEGG- ecj-JW3845 predicted transporter (421 aa)    
Predicted Functional Partners:
Spro_3581
PFAM- Xylose isomerase domain protein TIM barrel; KEGG- ecs-ECs4795 hypothetical protein (325 aa)
 
        0.924
Spro_3582
Transcriptional regulator, GntR family; PFAM- regulatory protein GntR HTH; UbiC transcription regulator-associated domain protein; KEGG- ecs-ECs4794 putative transcriptional regulator (235 aa)
 
        0.796
Spro_1970
KEGG- vvy-VV2646 putative isomerase (790 aa)
   
          0.660
Spro_1975
PFAM- amino acid permease-associated region; KEGG- ecp-ECP_3169 hypothetical transporter YgjI (496 aa)
   
        0.618
Spro_3585
PFAM- Fels-1 Propage domain protein; KEGG- bpd-BURPS668_1560 putative prophage protein (102 aa)
   
          0.553
Spro_1974
PFAM- conserved hypothetical protein; KEGG- vvy-VV2643 evolved beta-D-galactosidase, beta subunit; cryptic gene (150 aa)
 
        0.551
Spro_1505
KEGG- kpn-KPN_00294 putative receptor (544 aa)
   
          0.528
Spro_1504
KEGG- kpn-KPN_00293 putative enzyme (840 aa)
   
          0.503
Spro_1506
KEGG- kpn-KPN_00295 hypothetical protein (220 aa)
   
          0.489
Spro_1502
KEGG- ecs-ECs0323 hypothetical protein (195 aa)
   
          0.485
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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