STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_4169KEGG: eca:ECA0573 putative plasmid-related protein. (954 aa)    
Predicted Functional Partners:
Spro_4170
KEGG: eca:ECA0572 putative lipoprotein.
 
     0.948
Spro_4171
KEGG: eca:ECA0570 hypothetical protein.
 
     0.880
Spro_4172
KEGG: eca:ECA0569 hypothetical protein.
 
     0.880
Spro_4173
KEGG: eca:ECA0568 hypothetical protein.
 
     0.880
Spro_4174
KEGG: eca:ECA0567 hypothetical protein.
 
     0.880
Spro_4175
KEGG: plu:plu1080 hypothetical protein.
 
     0.879
Spro_0326
KEGG: eca:ECA0560 putative plasmid transfer protein.
 
  
 0.801
Spro_4096
KEGG: eca:ECA0560 putative plasmid transfer protein.
 
  
 0.801
Spro_4179
KEGG: eca:ECA0560 putative plasmid transfer protein.
 
  
 0.801
Spro_0350
KEGG: eca:ECA0578 hypothetical protein.
 
 
   0.792
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.