STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Spro_4768PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: yen:YE0141 putative periplasmic protein precursor. (318 aa)    
Predicted Functional Partners:
Spro_4765
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: yen:YE0144 putative sugar transport system permease.
 0.994
Spro_4767
ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ypp:YPDSF_3519 sugar transport system ATP-binding protein.
 
 0.994
Spro_4766
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: yps:YPTB0129 ABC ribose/sugar transporter, permease domain; Belongs to the binding-protein-dependent transport system permease family.
 0.989
Spro_4342
Multi-sensor hybrid histidine kinase; KEGG: ypi:YpsIP31758_0469 putative aerobic respiration control sensor protein ArcB; TIGRFAM: PAS sensor protein; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: PAS domain containing protein.
  
 
 0.791
Spro_0790
Multi-sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; Hpt domain protein; KEGG: ypm:YP_0304 two-component regulatory protein.
  
 
 0.782
Spro_1285
Hpt sensor hybrid histidine kinase; PFAM: response regulator receiver; ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; SMART: extracellular solute-binding protein family 3; KEGG: pfo:Pfl_1864 Hpt sensor hybrid histidine kinase.
   
 
 0.739
Spro_2247
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: ent:Ent638_2474 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.728
Spro_4695
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0366 carbohydrate uptake (CUT2 family) ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.712
Spro_4696
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: ypi:YpsIP31758_0367 carbohydrate uptake (CUT2 family) ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.706
Spro_4227
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: sbo:SBO_2572 putative transport system permease protein.
   0.705
Your Current Organism:
Serratia proteamaculans
NCBI taxonomy Id: 399741
Other names: S. proteamaculans 568, Serratia proteamaculans 568, Serratia proteamaculans str. 568, Serratia proteamaculans strain 568
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.