STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP61957.1KEGG: eca:ECA2426 oligogalacturonate lyase. (375 aa)    
Predicted Functional Partners:
ABP62787.1
Pectate disaccharide-lyase; KEGG: eca:ECA4510 exopolygalacturonate lyase.
  
  
  0.961
ABP59170.1
PFAM: periplasmic pectate lyase; KEGG: eca:ECA2135 periplasmic pectate lyase.
     
 0.913
kduI
4-deoxy-L-threo-5-hexulose uronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.
     
 0.905
ABP61961.1
KEGG: yps:YPTB2368 oligogalacturonate lyase.
  
  
 
0.902
ABP61956.1
PFAM: extracellular solute-binding protein, family 1; KEGG: eca:ECA2406 periplasmic pectic oligomers binding protein.
 
   
 0.777
ABP58799.1
KEGG: dvl:Dvul_2391 hypothetical protein.
  
     0.746
ABP58798.1
PFAM: sulfatase; KEGG: nme:NMB2010 YhbX/YhjW/YijP/YjdB family protein.
  
     0.733
ABP60149.1
PFAM: OmpA domain protein transmembrane region-containing protein; OmpA/MotB domain protein; KEGG: sec:SC1022 putative hydrogenase, membrane component; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.
  
 
 0.727
ABP61954.1
Oligogalacturonide ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: eca:ECA2404 binding-protein-dependent transport system, inner membrane component.
 
     0.628
ABP61953.1
Oligogalacturonide ABC transporter membrane protein; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yps:YPTB2359 putative ABC sugar transporter (permease).
 
     0.621
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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