STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABP62134.1PFAM: phage transcriptional activator, Ogr/delta; KEGG: ecv:APECO1_14 Ogr. (72 aa)    
Predicted Functional Partners:
ABP62136.1
PFAM: phage P2 GpU family protein; KEGG: ecv:APECO1_1178 phage protein U.
  
    0.794
ABP62135.1
PFAM: phage late control D family protein; KEGG: ecv:APECO1_1177 phage protein D.
  
    0.786
ABP62146.1
PFAM: GPW/gp25 family protein; KEGG: yps:YPTB1750 possible phage-related protein.
  
    0.639
ABP62145.1
PFAM: Baseplate J family protein; KEGG: ecv:APECO1_4480 putative baseplate assembly protein.
  
    0.622
ABP62147.1
PFAM: phage baseplate assembly protein V; KEGG: ecv:APECO1_4478 phage baseplate protein.
  
    0.619
ABP62139.1
PFAM: phage tail E family protein; KEGG: yps:YPTB1743 putative tail protein gpE P2 bacteriophage.
  
    0.602
ABP62137.1
TIGRFAM: phage tail tape measure protein, TP901 family; KEGG: ecv:APECO1_11 gpT.
  
    0.563
ABP62158.1
PFAM: phage capsid scaffolding; KEGG: ecv:APECO1_4468 putative phage capsid scaffolding protein.
   
    0.559
ABP62149.1
PFAM: P2 phage tail completion R family protein; KEGG: ecv:APECO1_4476 putative tail protein.
   
    0.539
ABP60039.1
PFAM: phage P2 GpU family protein; KEGG: stm:STM2696 Fels-2 prophage: similar to genes in phage phiCTX.
  
    0.532
Your Current Organism:
Enterobacter sp. 638
NCBI taxonomy Id: 399742
Other names: E. sp. 638
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