STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR70139.1KEGG: vch:VCA0121 hypothetical protein. (225 aa)    
Predicted Functional Partners:
ABR70129.1
PFAM: protein of unknown function DUF1305; KEGG: vch:VCA0111 hypothetical protein.
  
  
 0.888
ABR70138.1
PFAM: ImcF domain protein; protein of unknown function DUF1215; KEGG: vch:VCA0120 IcmF-related protein.
  
  
 0.713
ABR70126.1
PFAM: protein of unknown function DUF877; KEGG: vch:VCA0108 hypothetical protein.
  
  
 0.702
ABR70127.1
PFAM: GPW/gp25 family protein; KEGG: vch:VCA0109 hypothetical protein.
  
  
 0.686
ABR70125.1
PFAM: uncharacterised conserved protein UCP028301; KEGG: vch:VCA0107 hypothetical protein.
  
  
 0.668
ABR70134.1
PFAM: AAA ATPase central domain protein; Clp domain protein; ATPase associated with various cellular activities AAA_5; ATPase AAA-2 domain protein; SMART: AAA ATPase; KEGG: vch:VCA0116 ClpB protein; Belongs to the ClpA/ClpB family.
  
  
 0.665
ABR70128.1
PFAM: protein of unknown function DUF879; KEGG: vch:VCA0110 hypothetical protein.
  
  
 0.648
ABR70131.1
KEGG: vch:VCA0113 hypothetical protein.
  
  
 0.627
ABR70132.1
PFAM: protein of unknown function DUF876; KEGG: vch:VCA0114 hypothetical protein.
  
  
 0.625
ABR70136.1
KEGG: vch:VCA0118 hypothetical protein.
     
 0.624
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.