STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR70141.1PFAM: Rhs element Vgr protein; KEGG: vch:VCA0018 VgrG protein. (699 aa)    
Predicted Functional Partners:
ABR70129.1
PFAM: protein of unknown function DUF1305; KEGG: vch:VCA0111 hypothetical protein.
 
  
 0.907
ABR70125.1
PFAM: uncharacterised conserved protein UCP028301; KEGG: vch:VCA0107 hypothetical protein.
 
  
 0.903
ABR70112.1
PFAM: Rhs element Vgr protein; KEGG: vch:VCA0018 VgrG protein.
  
  
 
0.900
ABR70123.1
PFAM: Rhs element Vgr protein; KEGG: vch:VCA0018 VgrG protein.
  
  
 
0.900
ABR70126.1
PFAM: protein of unknown function DUF877; KEGG: vch:VCA0108 hypothetical protein.
 
  
 0.879
ABR70140.1
PFAM: protein of unknown function DUF796; KEGG: vch:VCA0017 hcp protein.
 
  
 0.878
ABR70133.1
KEGG: vch:VCA0115 hypothetical protein.
 
  
 0.875
ABR70127.1
PFAM: GPW/gp25 family protein; KEGG: vch:VCA0109 hypothetical protein.
 
  
 0.866
ABR70128.1
PFAM: protein of unknown function DUF879; KEGG: vch:VCA0110 hypothetical protein.
 
  
 0.865
ABR70131.1
KEGG: vch:VCA0113 hypothetical protein.
 
  
 0.865
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.