STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hemLTIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; KEGG: hch:HCH_06248 glutamate-1-semialdehyde-2,1-aminomutase. (427 aa)    
Predicted Functional Partners:
ABR69016.1
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: sdn:Sden_0303 porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.990
hemA
Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
 
 0.990
ABR72894.1
Porphobilinogen synthase; PFAM: delta-aminolevulinic acid dehydratase; KEGG: abo:ABO_2459 porphobilinogen synthase; Belongs to the ALAD family.
 
 
 0.989
ABR70545.1
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: abo:ABO_1784 non-ribosomal peptide synthase fragment.
  
 
 0.932
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
 
  
 0.931
ABR72157.1
TIGRFAM: uroporphyrin-III C-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: psp:PSPPH_3088 siroheme synthase; Belongs to the precorrin methyltransferase family.
 
   
 0.811
ABR71486.1
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; Methyltransferase type 11; Methyltransferase type 12; KEGG: pfo:Pfl_1845 peptide synthase.
  
 
 0.745
ABR71491.1
TIGRFAM: non-ribosomal peptide synthase; amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: sco:SCO3230 CDA peptide synthetase I.
  
 
 0.736
ABR71490.1
PFAM: AMP-dependent synthetase and ligase; Thioesterase; condensation domain protein; phosphopantetheine-binding; KEGG: mxa:MXAN_3636 non-ribosomal peptide synthetase.
  
 
 0.707
ABR71485.1
TIGRFAM: amino acid adenylation domain; PFAM: AMP-dependent synthetase and ligase; condensation domain protein; phosphopantetheine-binding; KEGG: ava:Ava_1611 amino acid adenylation.
  
 
 0.700
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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