node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABR70604.1 | ABR70605.1 | Mmwyl1_1678 | Mmwyl1_1679 | KEGG: pin:Ping_0382 hypothetical protein. | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | 0.777 |
ABR70605.1 | ABR70604.1 | Mmwyl1_1679 | Mmwyl1_1678 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | KEGG: pin:Ping_0382 hypothetical protein. | 0.777 |
ABR70605.1 | ABR70614.1 | Mmwyl1_1679 | Mmwyl1_1688 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | 0.666 |
ABR70605.1 | ABR71025.1 | Mmwyl1_1679 | Mmwyl1_2103 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.586 |
ABR70605.1 | ABR71767.1 | Mmwyl1_1679 | Mmwyl1_2855 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.601 |
ABR70605.1 | ABR72303.1 | Mmwyl1_1679 | Mmwyl1_3400 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.590 |
ABR70605.1 | pnp | Mmwyl1_1679 | Mmwyl1_1031 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.682 |
ABR70605.1 | rplC | Mmwyl1_1679 | Mmwyl1_4276 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.688 |
ABR70605.1 | rplM | Mmwyl1_1679 | Mmwyl1_2400 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.632 |
ABR70605.1 | rplX | Mmwyl1_1679 | Mmwyl1_4265 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.622 |
ABR70605.1 | rpsD | Mmwyl1_1679 | Mmwyl1_4252 | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.647 |
ABR70614.1 | ABR70605.1 | Mmwyl1_1688 | Mmwyl1_1679 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | 0.666 |
ABR70614.1 | ABR71025.1 | Mmwyl1_1688 | Mmwyl1_2103 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.794 |
ABR70614.1 | ABR71767.1 | Mmwyl1_1688 | Mmwyl1_2855 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.469 |
ABR70614.1 | ABR72303.1 | Mmwyl1_1688 | Mmwyl1_3400 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | 0.794 |
ABR70614.1 | pnp | Mmwyl1_1688 | Mmwyl1_1031 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. | 0.453 |
ABR70614.1 | rplC | Mmwyl1_1688 | Mmwyl1_4276 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.909 |
ABR70614.1 | rplM | Mmwyl1_1688 | Mmwyl1_2400 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.893 |
ABR70614.1 | rplX | Mmwyl1_1688 | Mmwyl1_4265 | GTP-binding protein HSR1-related; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily. | Ribosomal protein L24; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.893 |
ABR71025.1 | ABR70605.1 | Mmwyl1_2103 | Mmwyl1_1679 | Peptidyl-prolyl cis-trans isomerase cyclophilin type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. | PFAM: helicase domain protein; DbpA RNA-binding domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicases; KEGG: pst:PSPTO_5007 ATP-independent RNA helicase DbpA. | 0.586 |