STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR72682.1PFAM: inositol monophosphatase; KEGG: csa:Csal_1824 inositol-1(or 4)-monophosphatase. (270 aa)    
Predicted Functional Partners:
ABR69472.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: eli:ELI_03715 myo-inositol-2-dehydrogenase.
    
 0.902
ABR70527.1
PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mlo:mll4991 myo-inositol dehydrogenase (idhA).
    
 0.902
ABR72680.1
Hypothetical protein.
       0.671
ABR72681.1
KEGG: maq:Maqu_0642 hypothetical protein.
       0.671
ABR72683.1
Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: par:Psyc_1454 probable phospholipase/carboxylesterase family.
  
    0.665
ABR72679.1
PFAM: MscS Mechanosensitive ion channel; KEGG: pha:PSHAa0396 mechanosensitive channel protein.
       0.573
ABR68958.1
Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.
  
 
 0.532
ABR72677.1
PFAM: protein of unknown function DUF72; KEGG: vch:VC1165 hypothetical protein.
       0.498
greB
Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.
       0.494
nusG
NusG antitermination factor; Participates in transcription elongation, termination and antitermination.
   
 
 0.488
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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