STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR72683.1Carboxylesterase; PFAM: phospholipase/Carboxylesterase; KEGG: par:Psyc_1454 probable phospholipase/carboxylesterase family. (222 aa)    
Predicted Functional Partners:
ABR72682.1
PFAM: inositol monophosphatase; KEGG: csa:Csal_1824 inositol-1(or 4)-monophosphatase.
  
    0.665
ABR69168.1
PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; PepSY-associated TM helix domain protein; flavodoxin/nitric oxide synthase; Oxidoreductase FAD-binding domain protein; KEGG: maq:Maqu_3213 flavodoxin/nitric oxide synthase.
 
  
 0.631
ABR70870.1
PFAM: peptidase S15; KEGG: rle:pRL110145 hypothetical protein.
     
 0.621
ABR72680.1
Hypothetical protein.
       0.564
ABR72681.1
KEGG: maq:Maqu_0642 hypothetical protein.
       0.564
ABR72684.1
KEGG: mca:MCA1408 hypothetical protein.
       0.504
ABR72679.1
PFAM: MscS Mechanosensitive ion channel; KEGG: pha:PSHAa0396 mechanosensitive channel protein.
       0.484
ABR72677.1
PFAM: protein of unknown function DUF72; KEGG: vch:VC1165 hypothetical protein.
       0.422
greB
Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.
       0.422
dinB
DNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.
       0.411
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1
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