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rlmF protein (Marinomonas sp. MWYL1) - STRING interaction network
"rlmF" - Ribosomal RNA large subunit methyltransferase F in Marinomonas sp. MWYL1
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
rlmFRibosomal RNA large subunit methyltransferase F; Specifically methylates the adenine in position 1618 of 23S rRNA (327 aa)    
Predicted Functional Partners:
ABR72959.1
Transcriptional regulator, LysR family; PFAM- regulatory protein LysR; LysR substrate-binding; KEGG- vfi-VF0021 transcriptional regulators, LysR family (310 aa)
              0.559
ABR72957.1
TIGRFAM- diguanylate cyclase; PFAM- GGDEF domain containing protein; EAL domain protein; histidine kinase HAMP region domain protein; KEGG- she-Shewmr4_1077 diguanylate cyclase/phosphodiesterase (768 aa)
              0.552
ABR69130.1
PFAM- protein of unknown function DUF45; KEGG- shm-Shewmr7_2516 protein of unknown function DUF45 (166 aa)
 
          0.515
ABR69822.1
KEGG- abo-ABO_2416 hypothetical protein (73 aa)
   
          0.515
ksgA
Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (266 aa)
     
   
  0.502
rlmJ
Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA (280 aa)
           
  0.499
ABR71994.1
KEGG- sde-Sde_2951 hypothetical protein (138 aa)
   
          0.458
ABR72956.1
TIGRFAM- 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM- phospholipid/glycerol acyltransferase; KEGG- vfi-VF0402 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family (241 aa)
   
        0.442
ABR72583.1
KEGG- sde-Sde_2899 hypothetical protein (87 aa)
   
          0.424
ABR72960.1
PFAM- protein of unknown function DUF6 transmembrane; KEGG- shm-Shewmr7_0525 protein of unknown function DUF6, transmembrane (321 aa)
   
        0.417
Your Current Organism:
Marinomonas sp. MWYL1
NCBI taxonomy Id: 400668
Other names: M. sp. MWYL1, Marinomonas sp. MWYL1
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