STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7SRK1Ubiquitin-like domain-containing protein. (355 aa)    
Predicted Functional Partners:
A0A1X7SV59
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.949
A0A1X7VEE0
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.949
A0A1X7UP01
Uncharacterized protein.
   
 0.843
A0A1X7VMC3
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
  
 0.804
A0A1X7VF37
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.792
A0A1X7V3D3
40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.
   
 0.787
A0A1X7VVL0
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
   
 0.787
A0A1X7VTV5
40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
  
 0.785
A0A1X7VJ32
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
 0.783
A0A1X7U866
Uncharacterized protein.
   
 0.777
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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