STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1X7VNC3AbfB domain-containing protein. (400 aa)    
Predicted Functional Partners:
A0A1X7VE34
Smg4_UPF3 domain-containing protein.
    
 0.933
A0A1X7VDH2
Uncharacterized protein.
   
 0.926
A0A1X7VJW6
Uncharacterized protein.
   
 0.869
A0A1X7UMM0
CHHC U11-48K-type domain-containing protein.
   
 0.853
A0A1X7V476
Cwf21 domain-containing protein.
   
 0.853
A0A1X7ULA2
Pinin_SDK_memA domain-containing protein.
   
 0.844
A0A1X7VDW3
Uncharacterized protein.
   
 0.844
A0A1X7UJX9
MIF4G domain-containing protein.
    
 0.829
A0A1X7VJ10
Uncharacterized protein.
   
 0.818
A0A1X7V9V1
Uncharacterized protein.
    
 0.805
Your Current Organism:
Amphimedon queenslandica
NCBI taxonomy Id: 400682
Other names: A. queenslandica, Amphimedon queenslandica Hooper & Van Soest, 2006, Reniera sp. JGI-2005
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.