STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMY_0529Formate acetyltransferase. (749 aa)    
Predicted Functional Partners:
BMY_0530
Pyruvate formate-lyase 1-activating enzyme.
  
 0.997
BMY_1730
Hypothetical protein.
   
 
 0.896
BMY_1942
Fumarate hydratase class I, anaerobic; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.
   
 
 0.872
BMY_0499
Dihydrolipoamide dehydrogenase.
   
 
 0.851
BMY_0087
Hypothetical protein.
     
 0.838
BMY_2067
Hypothetical protein.
     
 0.838
BMY_2068
Hypothetical protein.
     
 0.838
BMY_0471
Hypothetical protein.
   
 
 0.817
BMY_0869
Hypothetical protein.
  
 
 0.784
BMY_2093
acyl-CoA dehydrogenase YdbM.
     
 0.700
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.