STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
macBMacrolide ABC transporter permease/ATP-binding protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides. (652 aa)    
Predicted Functional Partners:
BMY_0143
MexH family multidrug efflux RND transporter periplasmic adaptor subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 
 0.999
BMY_0604
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.999
BMY_1056
Outer membrane protein oprM.
 
 0.999
BMY_1414
Hypothetical protein.
  
 
 0.999
BMY_1449
Acriflavin resistance protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 
 0.999
BMY_1237
Hypothetical protein.
  
 0.989
BMY_1238
Hypothetical protein.
 
 0.989
BMY_1239
Hypothetical protein.
 
 0.989
lolD
Lipoprotein releasing system, ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.
 
0.977
BMY_1200
Hypothetical protein.
 
 
 0.896
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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