STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMY_1222SUF system Fe-S cluster assembly regulator. (150 aa)    
Predicted Functional Partners:
BMY_0740
NifU-like protein.
  
  
 0.946
BMY_0504
Hypothetical protein.
  
 
 0.812
BMY_1162
Hypothetical protein.
  
 
 0.812
BMY_1034
Transcriptional regulator.
  
     0.693
BMY_1356
Hypothetical protein; Belongs to the HesB/IscA family.
  
  
 0.644
BMY_1223
Fe-S cluster assembly protein SufB.
     
 0.616
BMY_1225
Fe-S cluster assembly protein SufD.
 
   
 0.615
BMY_1224
ABC transporter ATP-binding protein.
     
 0.561
BMY_1226
Hypothetical protein; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
       0.518
BMY_1221
Hypothetical protein.
       0.451
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.