STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BMY_1680ABC transporter substrate-binding protein. (334 aa)    
Predicted Functional Partners:
BMY_1683
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.994
BMY_1681
ABC transporter ATP-binding protein.
 
  
 0.993
BMY_1682
ABC transporter permease yclO; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.992
BMY_1684
Inner membrane transporter RhtA.
       0.499
BMY_1924
Iron(3+)-hydroxamate import ATP-binding protein FhuC.
 
  
 0.487
Your Current Organism:
Wohlfahrtiimonas chitiniclastica
NCBI taxonomy Id: 400946
Other names: CCM 7401, DSM 18708, Ignatzschineria sp. 5401129, W. chitiniclastica, Wohlfahrtiimonas chitiniclastica Toth et al. 2008, strain S5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.