STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV83314.1PFAM: BioY protein; KEGG: ara:Arad_1269 hypothetical protein. (193 aa)    
Predicted Functional Partners:
ADV83315.1
PFAM: protein of unknown function DUF1284; KEGG: sno:Snov_4438 protein of unknown function DUF1284.
    0.943
ADV82828.1
PFAM: BioY protein; KEGG: aca:ACP_0137 BioY family protein.
  
  
 
0.924
ADV83313.1
PFAM: Lipocalin family protein; KEGG: gsu:GSU2326 outer membrane lipoprotein; Belongs to the calycin superfamily. Lipocalin family.
       0.496
Your Current Organism:
Terriglobus saanensis
NCBI taxonomy Id: 401053
Other names: Acidobacterium sp. SP1PR4, T. saanensis SP1PR4, Terriglobus saanensis SP1PR4, Terriglobus saanensis str. SP1PR4, Terriglobus saanensis strain SP1PR4, Terriglobus sp. SP1PR4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.