STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV84813.1KEGG: mpa:MAP1845c hypothetical protein. (167 aa)    
Predicted Functional Partners:
ADV84814.1
Glucan endo-1,3-beta-D-glucosidase; KEGG: sus:Acid_2816 glycoside hydrolase family protein; PFAM: glycoside hydrolase family 16.
       0.678
ADV84812.1
PFAM: peptidase M28; KEGG: sus:Acid_6315 peptidase M28.
       0.625
ADV84817.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: ddr:Deide_1p00160 mercuric reductase.
 
     0.433
Your Current Organism:
Terriglobus saanensis
NCBI taxonomy Id: 401053
Other names: Acidobacterium sp. SP1PR4, T. saanensis SP1PR4, Terriglobus saanensis SP1PR4, Terriglobus saanensis str. SP1PR4, Terriglobus saanensis strain SP1PR4, Terriglobus sp. SP1PR4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.