STRINGSTRING
OGLUM03G01750.2 protein (Oryza glumipatula) - STRING interaction network
"OGLUM03G01750.2" - annotation not available in Oryza glumipatula
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGLUM03G01750.2annotation not available (230 aa)    
Predicted Functional Partners:
OGLUM04G23830.1
annotation not available (389 aa)
       
 
  0.859
OGLUM04G21540.1
annotation not available (895 aa)
       
 
  0.799
OGLUM02G34890.1
Phytochrome; Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light- the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region (1128 aa)
     
   
  0.782
OGLUM03G14900.3
annotation not available (1194 aa)
     
   
  0.782
OGLUM09G01400.1
annotation not available (775 aa)
           
  0.780
OGLUM03G40990.1
annotation not available (440 aa)
           
  0.773
RFT1
annotation not available (178 aa)
       
 
  0.756
OGLUM01G05830.1
annotation not available (1271 aa)
       
 
  0.753
OGLUM08G06850.4
annotation not available (815 aa)
           
  0.705
OGLUM06G07830.1
annotation not available (164 aa)
     
 
  0.695
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula, Oryza glumipatula Steud.
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