STRINGSTRING
OGLUM04G16920.1 protein (Oryza glumipatula) - STRING interaction network
"OGLUM04G16920.1" - annotation not available in Oryza glumipatula
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OGLUM04G16920.1annotation not available (373 aa)    
Predicted Functional Partners:
OGLUM04G13430.2
annotation not available (846 aa)
           
  0.512
OGLUM02G20940.1
annotation not available (804 aa)
           
  0.512
OGLUM12G09810.1
annotation not available (527 aa)
           
  0.465
Your Current Organism:
Oryza glumipatula
NCBI taxonomy Id: 40148
Other names: O. glumipatula, Oryza glumaepatula, Oryza glumipatula, Oryza glumipatula Steud.
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