STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BM38Phenylalanyl-trna synthetase. (493 aa)    
Predicted Functional Partners:
A0A0P1BG09
Phenylalanyl-trna synthetase subunit beta.
  
 0.999
A0A0P1B9T2
Phenylalanyl-trna synthetase alpha chain.
   
 
 0.945
A0A0P1BL03
S-adenosyl-l-methionine-dependent methyltransferase.
 
 
   0.823
A0A0P1BPF6
Tyrosine--tRNA ligase.
  
  
 0.777
A0A0N7L8T5
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
 
 
  
 0.764
A0A0P1BCC8
Argininosuccinate synthase.
   
  0.732
A0A0P1BD43
Prolyl-tRNA synthetase.
   
  
 0.729
A0A0P1BGY8
Dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase; Adds the first Dol-P-Man derived mannose in an alpha-1,3 linkage to Man(5)GlcNAc(2)-PP-Dol.
     
 0.727
A0A0P1BF17
Valine-trna ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
  
 0.720
A0A0P1BC66
Arginyl-trna synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.714
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.