STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P1BN37FOG: Predicted E3 ubiquitin ligase. (1226 aa)    
Predicted Functional Partners:
A0A0P1BCG2
Ubiquitin-40s ribosomal protein s27a.
    
 0.743
A0A0P1BHH1
Probable kex2-endoproteinase of late golgi compartment; Belongs to the peptidase S8 family.
    
  0.743
A0A0P1BFB8
Uncharacterized protein.
    
 0.724
A0A0P1BRH1
Ubiquitin-60s ribosomal protein l40 fusion protein.
    
 0.724
A0A0P1BE24
Polyubiquitin.
    
 0.720
A0A0P1BEL5
Ubiquitin and ubiquitin-like proteins.
    
 0.720
A0A0P1BEK1
Ubiquitin-conjugating enzyme e2; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.676
A0A0P1BRT4
Ubiquitin-conjugating enzyme e2 d e; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.676
A0A0P1BRW6
Ubiquitin-conjugating enzyme; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.676
A0A0P1BDU3
Ubiquitin-protein ligase; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.663
Your Current Organism:
Ceraceosorus bombacis
NCBI taxonomy Id: 401625
Other names: ATCC 22867, C. bombacis, Dicellomyces bombacis
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.