Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FP1205 | acdS | FP1205 | FP1206 | Putative muramidase precursor. | 1-aminocyclopropane-1-carboxylate deaminase. | 0.916 |
FP1205 | guaA | FP1205 | FP1894 | Putative muramidase precursor. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.612 |
FP1205 | hemL | FP1205 | FP1204 | Putative muramidase precursor. | Glutamate-1-semialdehyde aminotransferase. | 0.681 |
acdS | FP1205 | FP1206 | FP1205 | 1-aminocyclopropane-1-carboxylate deaminase. | Putative muramidase precursor. | 0.916 |
acdS | hemL | FP1206 | FP1204 | 1-aminocyclopropane-1-carboxylate deaminase. | Glutamate-1-semialdehyde aminotransferase. | 0.681 |
fabD | gltA | FP0408 | FP1308 | Malonyl CoA-acyl carrier protein transacylase. | Citrate (Si)-synthase; Belongs to the citrate synthase family. | 0.489 |
fabD | hemB | FP0408 | FP0035 | Malonyl CoA-acyl carrier protein transacylase. | Porphobilinogen synthase; Belongs to the ALAD family. | 0.583 |
fabD | hemL | FP0408 | FP1204 | Malonyl CoA-acyl carrier protein transacylase. | Glutamate-1-semialdehyde aminotransferase. | 0.694 |
gltA | fabD | FP1308 | FP0408 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Malonyl CoA-acyl carrier protein transacylase. | 0.489 |
gltA | hemL | FP1308 | FP1204 | Citrate (Si)-synthase; Belongs to the citrate synthase family. | Glutamate-1-semialdehyde aminotransferase. | 0.502 |
guaA | FP1205 | FP1894 | FP1205 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Putative muramidase precursor. | 0.612 |
guaA | hemL | FP1894 | FP1204 | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | Glutamate-1-semialdehyde aminotransferase. | 0.535 |
hemA | hemB | FP0044 | FP0035 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Porphobilinogen synthase; Belongs to the ALAD family. | 0.908 |
hemA | hemC | FP0044 | FP0043 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.989 |
hemA | hemE | FP0044 | FP0041 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.816 |
hemA | hemL | FP0044 | FP1204 | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | Glutamate-1-semialdehyde aminotransferase. | 0.994 |
hemB | fabD | FP0035 | FP0408 | Porphobilinogen synthase; Belongs to the ALAD family. | Malonyl CoA-acyl carrier protein transacylase. | 0.583 |
hemB | hemA | FP0035 | FP0044 | Porphobilinogen synthase; Belongs to the ALAD family. | Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA). | 0.908 |
hemB | hemC | FP0035 | FP0043 | Porphobilinogen synthase; Belongs to the ALAD family. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.998 |
hemB | hemE | FP0035 | FP0041 | Porphobilinogen synthase; Belongs to the ALAD family. | Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III. | 0.910 |
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