STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FP1877Probable ABC-type multidrug transport system, ATPase and permease components. (733 aa)    
Predicted Functional Partners:
FP1879
Protein of unknown function related to arylsulfatase regulator (Fe-S oxidoreductase).
 
    0.844
FP1878
Protein of unknown function.
       0.773
FP0834
Probable ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.741
msbA
Probable lipid A transport system, ATPase and permease components.
  
 
 
0.733
FP1424
Probable ABC-type transport system, ATPase and permease components.
  
 
 
0.733
FP1950
Probable ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.731
FP0532
Probable ABC-type multidrug transport system, ATPase and permease components.
  
 
 
0.730
FP0295
Probable ABC-type transport system, membrane fusion efflux lipoprotein precursor component.
  
 0.653
FP0421
Probable ABC-type transport system, membrane fusion efflux protein component.
  
 0.653
FP0503
Probable membrane fusion efflux protein.
  
 0.653
Your Current Organism:
Flavobacterium psychrophilum
NCBI taxonomy Id: 402612
Other names: F. psychrophilum JIP02/86, Flavobacterium psychrophilum JIP02/86, Flavobacterium psychrophilum str. JIP02/86, Flavobacterium psychrophilum strain JIP02/86
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