STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hpaIIRType II restriction endonuclease HpaII. (357 aa)    
Predicted Functional Partners:
hpaIIM
Type II modification methyltransferase HpaII.
     0.955
FP2267
Acyl carrier protein.
       0.773
FP2268
Protein of unknown function.
       0.773
FP2269
3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.773
FP2270
Probable esterase.
       0.773
FP2271
Probable ABC-type transport system, permease component.
       0.773
FP2272
Probable ABC-type transport system, ATPase component.
       0.773
FP2150
Probable type II modification methyltransferase.
     0.754
FP2266
Protein of unknown function.
       0.648
FP0858
Probable type II modification methyltransferase.
 
     0.644
Your Current Organism:
Flavobacterium psychrophilum
NCBI taxonomy Id: 402612
Other names: F. psychrophilum JIP02/86, Flavobacterium psychrophilum JIP02/86, Flavobacterium psychrophilum str. JIP02/86, Flavobacterium psychrophilum strain JIP02/86
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.