node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Rpic_3674 | rlmD | Rpic_3674 | Rpic_1053 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.583 |
Rpic_3674 | rlmE | Rpic_3674 | Rpic_2030 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | 0.807 |
Rpic_3674 | rpmD | Rpic_3674 | Rpic_3279 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | PFAM: ribosomal protein L30; KEGG: rso:RSc3001 50S ribosomal protein L30. | 0.768 |
Rpic_3674 | rsmA | Rpic_3674 | Rpic_0394 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.452 |
Rpic_3674 | trmB | Rpic_3674 | Rpic_0653 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.576 |
Rpic_3674 | truA | Rpic_3674 | Rpic_2139 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.526 |
Rpic_3674 | truB | Rpic_3674 | Rpic_1119 | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.620 |
Rpic_4387 | rpmD | Rpic_4387 | Rpic_3279 | KEGG: reu:Reut_B5193 hypothetical protein. | PFAM: ribosomal protein L30; KEGG: rso:RSc3001 50S ribosomal protein L30. | 0.922 |
Rpic_4387 | trmB | Rpic_4387 | Rpic_0653 | KEGG: reu:Reut_B5193 hypothetical protein. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.539 |
Rpic_4387 | truB | Rpic_4387 | Rpic_1119 | KEGG: reu:Reut_B5193 hypothetical protein. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.445 |
rlmD | Rpic_3674 | Rpic_1053 | Rpic_3674 | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.583 |
rlmD | rsmA | Rpic_1053 | Rpic_0394 | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.487 |
rlmD | trmB | Rpic_1053 | Rpic_0653 | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.620 |
rlmD | truB | Rpic_1053 | Rpic_1119 | RNA methyltransferase, TrmA family; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.469 |
rlmE | Rpic_3674 | Rpic_2030 | Rpic_3674 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Sun protein; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.807 |
rlmE | rpmD | Rpic_2030 | Rpic_3279 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | PFAM: ribosomal protein L30; KEGG: rso:RSc3001 50S ribosomal protein L30. | 0.899 |
rlmE | rsmA | Rpic_2030 | Rpic_0394 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.752 |
rlmE | trmB | Rpic_2030 | Rpic_0653 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.663 |
rlmE | truA | Rpic_2030 | Rpic_2139 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.608 |
rlmE | truB | Rpic_2030 | Rpic_1119 | Ribosomal RNA methyltransferase RrmJ/FtsJ; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit. | tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily. | 0.723 |