STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rpic_1657KEGG: reh:H16_A1978 hypothetical protein. (220 aa)    
Predicted Functional Partners:
Rpic_1656
KEGG: reh:H16_A1977 hypothetical protein.
 
    0.945
Rpic_1706
KEGG: xau:Xaut_4588 hypothetical protein.
 
    0.708
Rpic_1655
KEGG: bvi:Bcep1808_7285 YHS domain protein.
       0.638
Rpic_1653
KEGG: reu:Reut_C6196 ATPase, E1-E2 type:copper-translocating P-type ATPase:heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; YHS domain protein; E1-E2 ATPase-associated domain protein; SMART: TRASH domain protein.
      0.611
Rpic_1654
Hypothetical protein.
       0.600
Rpic_1652
KEGG: bvi:Bcep1808_7265 hypothetical protein.
 
     0.537
Rpic_1767
PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: rme:Rmet_5984 isoprenylcysteine carboxyl methyltransferase.
  
     0.413
Your Current Organism:
Ralstonia pickettii 12J
NCBI taxonomy Id: 402626
Other names: R. pickettii 12J, Ralstonia pickettii str. 12J, Ralstonia pickettii strain 12J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.