STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_01918Choline kinase. (470 aa)    
Predicted Functional Partners:
SJAG_01509
WD repeat protein.
    
 0.970
SJAG_00946
Cholinephosphate cytidylyltransferase.
     
 0.931
SJAG_00622
Glycerophosphoryl diester phosphodiesterase Gde1.
  
 
 0.926
SJAG_01320
WD repeat protein Pop3.
    
 0.883
SJAG_00457
Gtr1/RagA G protein Gtr1.
    
 0.817
SJAG_02723
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.816
SJAG_03745
Exosome subunit Rrp6.
    
 0.816
SJAG_03067
Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.
    
 0.816
SJAG_03371
Gtr1/RagA G protein Gtr2.
    
 0.808
SJAG_04628
Ethanolamine-phosphate cytidylyltransferase.
   
 
 0.805
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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