STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO34667.1Sep-tRNA:Cys-tRNA synthase; Converts O-phospho-L-seryl-tRNA(Cys) (Sep-tRNA(Cys)) to L- cysteinyl-tRNA(Cys) (Cys-tRNA(Cys)); Belongs to the SepCysS family. (380 aa)    
Predicted Functional Partners:
ABO34689.1
KEGG: mmp:MMP1217 hypothetical protein.
    
 
 0.999
sepS
phosphoserine-tRNA(Cys) ligase; Catalyzes the attachment of O-phosphoserine (Sep) to tRNA(Cys).
  
 0.999
cysS
KEGG: mmp:MMP1060 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: cysteinyl-tRNA synthetase, class Ia.
     
 0.964
ABO35317.1
O-phospho-L-seryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family.
      
 0.944
ABO36106.1
PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mmp:MMP1599 Trk system potassium uptake protein A.
  
    0.889
ABO34666.1
KEGG: mmp:MMP1241 hypothetical protein.
       0.796
thiI
Thiamine biosynthesis/tRNA modification protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.
     
 0.776
ABO34404.1
seryl-tRNA(Sec) kinase; PFAM: Chromatin associated protein KTI12; KEGG: mmp:MMP1490 ATP/GTP-binding site motif A (P-loop).
  
   
 0.736
ABO35979.1
TIGRFAM: L-seryl-tRNA selenium transferase; KEGG: mmp:MMP0002 L-seryl-tRNA selenium transferase related protein.
   
  
 0.732
ABO34668.1
PFAM: PP-loop domain protein; KEGG: mmp:MMP1239 hypothetical protein.
       0.727
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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