STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
atpAATP synthase, A subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (586 aa)    
Predicted Functional Partners:
atpD
V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpB
Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
 
0.999
atpF
Vacuolar H+-transporting two-sector ATPase, F subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpC
H+-transporting two-sector ATPase, C (AC39) subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
atpE
H+-transporting two-sector ATPase, E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
 
 0.999
ABO34867.1
PFAM: H+-transporting two-sector ATPase, C subunit; KEGG: mmp:MMP1040 A1A0 ATPase, subunit K.
 
 0.999
ABO34868.1
PFAM: V-type ATPase, 116 kDa subunit; KEGG: mmp:MMP1039 A1A0 ATPase, subunit I; Belongs to the V-ATPase 116 kDa subunit family.
 
 0.999
ABO34869.1
KEGG: mmp:MMP1038 A1A0 ATPase, subunit H.
   
 0.995
ABO34860.1
PFAM: Protein of unknown function DUF22; KEGG: mmp:MMP1047 hypothetical protein.
  
    0.982
ABO35760.1
Inorganic diphosphatase; PFAM: phosphoesterase, RecJ domain protein; DHHA2 domain protein; KEGG: mmp:MMP0219 putative manganese-dependent inorganic pyrophosphatase.
    
  0.902
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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