node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABO35836.1 | eIF5A | MmarC5_1539 | MmarC5_0759 | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.999 |
ABO35836.1 | rpl13 | MmarC5_1539 | MmarC5_0269 | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.688 |
ABO35836.1 | rps13 | MmarC5_1539 | MmarC5_0274 | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.448 |
ABO35836.1 | rps4 | MmarC5_1539 | MmarC5_0273 | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.463 |
ABO35836.1 | rps7 | MmarC5_1539 | MmarC5_0210 | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. | 0.570 |
eIF5A | ABO35836.1 | MmarC5_0759 | MmarC5_1539 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | 0.999 |
eIF5A | rpl13 | MmarC5_0759 | MmarC5_0269 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.998 |
eIF5A | rpl18 | MmarC5_0759 | MmarC5_0160 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.998 |
eIF5A | rpl29 | MmarC5_0759 | MmarC5_0173 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | PFAM: ribosomal protein L29; KEGG: mmp:MMP1405 LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.998 |
eIF5A | rpl3 | MmarC5_0759 | MmarC5_0033 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |
eIF5A | rps12 | MmarC5_0759 | MmarC5_0211 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | SSU ribosomal protein S12P; With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.998 |
eIF5A | rps13 | MmarC5_0759 | MmarC5_0274 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement; Belongs to the universal ribosomal protein uS13 family. | 0.998 |
eIF5A | rps17 | MmarC5_0759 | MmarC5_0170 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.999 |
eIF5A | rps4 | MmarC5_0759 | MmarC5_0273 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
eIF5A | rps7 | MmarC5_0759 | MmarC5_0210 | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. | 0.998 |
rpl13 | ABO35836.1 | MmarC5_0269 | MmarC5_1539 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | KEGG: mmp:MMP0137 putative deoxyhypusine synthase; TIGRFAM: putative deoxyhypusine synthase; PFAM: deoxyhypusine synthase. | 0.688 |
rpl13 | eIF5A | MmarC5_0269 | MmarC5_0759 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Translation initiation factor 5A precursor (eIF-5A); Functions by promoting the formation of the first peptide bond; Belongs to the eIF-5A family. | 0.998 |
rpl13 | rpl18 | MmarC5_0269 | MmarC5_0160 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.999 |
rpl13 | rpl29 | MmarC5_0269 | MmarC5_0173 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | PFAM: ribosomal protein L29; KEGG: mmp:MMP1405 LSU ribosomal protein L29P; Belongs to the universal ribosomal protein uL29 family. | 0.999 |
rpl13 | rpl3 | MmarC5_0269 | MmarC5_0033 | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.999 |