node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cmk | nusA | MmarC5_0979 | MmarC5_0212 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | 0.971 |
cmk | rpl14 | MmarC5_0979 | MmarC5_0169 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.976 |
cmk | rpl14e | MmarC5_0979 | MmarC5_0980 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L14E; KEGG: mmp:MMP0625 KOW motif; Belongs to the eukaryotic ribosomal protein eL14 family. | 0.998 |
cmk | rpl22 | MmarC5_0979 | MmarC5_0175 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.976 |
cmk | rpl24 | MmarC5_0979 | MmarC5_0168 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.976 |
cmk | rpl3 | MmarC5_0979 | MmarC5_0033 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.975 |
cmk | rpl34e | MmarC5_0979 | MmarC5_0978 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | PFAM: Ribosomal protein L34e; KEGG: mmp:MMP0627 ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.999 |
cmk | rpl4 | MmarC5_0979 | MmarC5_0032 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.976 |
cmk | rpl5 | MmarC5_0979 | MmarC5_0166 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.976 |
cmk | rps4e | MmarC5_0979 | MmarC5_0167 | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E-like; Ribosomal protein S4E, central; KEGG: mmp:MMP1411 SSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.976 |
nusA | cmk | MmarC5_0212 | MmarC5_0979 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | TIGRFAM: cytidylate kinase, putative; KEGG: mmp:MMP0626 cytidylate kinase. | 0.971 |
nusA | rpl14 | MmarC5_0212 | MmarC5_0169 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.993 |
nusA | rpl14e | MmarC5_0212 | MmarC5_0980 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L14E; KEGG: mmp:MMP0625 KOW motif; Belongs to the eukaryotic ribosomal protein eL14 family. | 0.976 |
nusA | rpl22 | MmarC5_0212 | MmarC5_0175 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L22P; This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.983 |
nusA | rpl24 | MmarC5_0212 | MmarC5_0168 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L24P; One of two assembly initiator proteins, it binds directly to the 5'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit. | 0.994 |
nusA | rpl3 | MmarC5_0212 | MmarC5_0033 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family. | 0.994 |
nusA | rpl34e | MmarC5_0212 | MmarC5_0978 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | PFAM: Ribosomal protein L34e; KEGG: mmp:MMP0627 ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.966 |
nusA | rpl4 | MmarC5_0212 | MmarC5_0032 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L4P; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.973 |
nusA | rpl5 | MmarC5_0212 | MmarC5_0166 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. May contact the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs. | 0.983 |
nusA | rps4e | MmarC5_0212 | MmarC5_0167 | NusA family KH domain protein; Participates in transcription termination. Belongs to the NusA family. | PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E-like; Ribosomal protein S4E, central; KEGG: mmp:MMP1411 SSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family. | 0.961 |