node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ABO34575.1 | ABO35307.1 | MmarC5_0259 | MmarC5_1001 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | 0.646 |
ABO34575.1 | ABO35316.1 | MmarC5_0259 | MmarC5_1010 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: mmp:MMP0596 RNA 2'-O-methyl modification protein (NOP5/NOP56). | 0.899 |
ABO34575.1 | flpA | MmarC5_0259 | MmarC5_1009 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | rRNA 2'-O-methyltransferase fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.963 |
ABO34575.1 | rpl13 | MmarC5_0259 | MmarC5_0269 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.972 |
ABO34575.1 | rpl7ae | MmarC5_0259 | MmarC5_0963 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.935 |
ABO34575.1 | rps4 | MmarC5_0259 | MmarC5_0273 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.446 |
ABO34575.1 | rps6e | MmarC5_0259 | MmarC5_0383 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | PFAM: ribosomal protein S6e; KEGG: mmp:MMP1207 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.452 |
ABO34575.1 | rps9 | MmarC5_0259 | MmarC5_0268 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | PFAM: ribosomal protein S9; KEGG: mmp:MMP1325 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.928 |
ABO34575.1 | truB | MmarC5_0259 | MmarC5_1720 | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.950 |
ABO35307.1 | ABO34575.1 | MmarC5_1001 | MmarC5_0259 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | 0.646 |
ABO35307.1 | ABO35316.1 | MmarC5_1001 | MmarC5_1010 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: mmp:MMP0596 RNA 2'-O-methyl modification protein (NOP5/NOP56). | 0.991 |
ABO35307.1 | flpA | MmarC5_1001 | MmarC5_1009 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | rRNA 2'-O-methyltransferase fibrillarin; Involved in pre-rRNA and tRNA processing. Utilizes the methyl donor S-adenosyl-L-methionine to catalyze the site-specific 2'-hydroxyl methylation of ribose moieties in rRNA and tRNA. Site specificity is provided by a guide RNA that base pairs with the substrate. Methylation occurs at a characteristic distance from the sequence involved in base pairing with the guide RNA; Belongs to the methyltransferase superfamily. Fibrillarin family. | 0.968 |
ABO35307.1 | fusA | MmarC5_1001 | MmarC5_0209 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...] | 0.412 |
ABO35307.1 | rpl13 | MmarC5_1001 | MmarC5_0269 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.483 |
ABO35307.1 | rpl7ae | MmarC5_1001 | MmarC5_0963 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | LSU ribosomal protein L7AE; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.971 |
ABO35307.1 | rps4 | MmarC5_1001 | MmarC5_0273 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.998 |
ABO35307.1 | rps6e | MmarC5_1001 | MmarC5_0383 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | PFAM: ribosomal protein S6e; KEGG: mmp:MMP1207 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. | 0.999 |
ABO35307.1 | rps9 | MmarC5_1001 | MmarC5_0268 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | PFAM: ribosomal protein S9; KEGG: mmp:MMP1325 SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family. | 0.956 |
ABO35307.1 | truB | MmarC5_1001 | MmarC5_1720 | PFAM: KH, type 1, domain protein; SMART: KH domain protein; KEGG: mmp:MMP0605 hypothetical protein. | tRNA pseudouridine synthase B; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.962 |
ABO35316.1 | ABO34575.1 | MmarC5_1010 | MmarC5_0259 | rRNA biogenesis protein Nop56/Nop58; PFAM: Pre-mRNA processing ribonucleoprotein, binding region; NOSIC; KEGG: mmp:MMP0596 RNA 2'-O-methyl modification protein (NOP5/NOP56). | Ras superfamily GTP-binding protein YlqF; PFAM: GTP-binding protein, HSR1-related; KEGG: mmp:MMP1334 solute-binding protein/glutamate receptor:ATP/GTP-binding site motif A (P-loop):GTP-binding protein, HSR1-related:GTP-binding. | 0.899 |