STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABO35548.12,3-di-O-geranylgeranylglyceryl phosphate reductase; Is involved in the reduction of 2,3- digeranylgeranylglycerophospholipids (unsaturated archaeols) into 2,3- diphytanylglycerophospholipids (saturated archaeols) in the biosynthesis of archaeal membrane lipids. Catalyzes the formation of archaetidic acid (2,3-di-O-phytanyl-sn-glyceryl phosphate) from 2,3-di- O-geranylgeranylglyceryl phosphate (DGGGP) via the hydrogenation of each double bond of the isoprenoid chains. (390 aa)    
Predicted Functional Partners:
ABO35547.1
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; KEGG: mmp:MMP0389 ferredoxin.
 
  
 0.992
ABO36027.1
Geranylgeranylglycerol-phosphate geranylgeranyltransferase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C2 hydroxyl of (S)-3-O-geranylgeranylglyceryl phosphate (GGGP). This reaction is the second ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
 
 
 0.974
carS
Protein of unknown function DUF46; Catalyzes the formation of CDP-2,3-bis-(O-geranylgeranyl)-sn- glycerol (CDP-archaeol) from 2,3-bis-(O-geranylgeranyl)-sn-glycerol 1- phosphate (DGGGP) and CTP. This reaction is the third ether-bond- formation step in the biosynthesis of archaeal membrane lipids.
     
 0.915
ABO35546.1
Protein of unknown function DUF84; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.
  
    0.625
ABO35130.1
Cobaltochelatase CobN subunit; PFAM: CobN/magnesium chelatase; KEGG: mac:MA0348 protoporphyrin IX magnesium chelatase.
 
  
 0.606
ABO35778.1
Cobaltochelatase CobN subunit; PFAM: CobN/magnesium chelatase; KEGG: mmp:MMP0493 cobaltochelatase.
 
  
 0.605
ABO35545.1
Phosphoserine aminotransferase apoenzyme / L-aspartate aminotransferase apoenzyme; PFAM: aminotransferase, class V; KEGG: mmp:MMP0391 aspartate aminotransferase.
  
    0.569
ABO35533.1
PFAM: Glycosyltransferase 28, C-terminal domain; KEGG: mmp:MMP0403 hypothetical protein.
 
  
 0.549
ABO35826.1
UDP-galactopyranose mutase; KEGG: mmp:MMP0146 hypothetical protein.
 
  
 0.518
ABO36057.1
KEGG: mmp:MMP1648 hypothetical protein.
 
  
 0.511
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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