STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eif2bTranslation initiation factor 2 subunit beta (aeIF-2b); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the eIF-2-beta/eIF-5 family. (138 aa)    
Predicted Functional Partners:
eIF1A
Translation initiation factor 1A (aeIF-1A); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits.
 
 0.999
ABO35996.1
PFAM: RNA binding S1 domain protein; translation initiation factor 2, alpha subunit; KEGG: mmp:MMP1707 translation initiation factor aIF-2, subunit alpha.
  
 0.999
rps4e
PFAM: RNA-binding S4 domain protein; Ribosomal protein S4E-like; Ribosomal protein S4E, central; KEGG: mmp:MMP1411 SSU ribosomal protein S4E; Belongs to the eukaryotic ribosomal protein eS4 family.
  
  0.998
rps3
SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.
  
 0.998
eif2g
Translation initiation factor 2 subunit gamma (aeIF-2g); eIF-2 functions in the early steps of protein synthesis by forming a ternary complex with GTP and initiator tRNA. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EIF2G subfamily.
  
 0.998
rps6e
PFAM: ribosomal protein S6e; KEGG: mmp:MMP1207 ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.
  
 0.998
rps17
SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.
 
 0.997
rps3ae
PFAM: ribosomal protein S3Ae; KEGG: mmp:MMP0669 SSU ribosomal protein S3AE; Belongs to the eukaryotic ribosomal protein eS1 family.
 
 0.997
rps15
PFAM: ribosomal protein S15; Ribosomal S13S15-like; KEGG: mmp:MMP1579 probable SSU ribosomal protein S15P/S13E.
  
 0.997
rps19
SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.
    
 0.996
Your Current Organism:
Methanococcus maripaludis C5
NCBI taxonomy Id: 402880
Other names: M. maripaludis C5, Methanococcus maripaludis str. C5, Methanococcus maripaludis strain C5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.