Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| nac | rpl18 | MmarC5_1383 | MmarC5_0160 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | 0.985 |
| nac | rpl18a | MmarC5_1383 | MmarC5_1617 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | PFAM: Ribosomal LX protein; KEGG: mmp:MMP0060 ribosomal LX protein. | 0.981 |
| nac | rpl18e | MmarC5_1383 | MmarC5_0270 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | PFAM: ribosomal protein L15; KEGG: mmp:MMP1323 LSU ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.994 |
| nac | rpl19e | MmarC5_1383 | MmarC5_0161 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | LSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.978 |
| nac | rpl21e | MmarC5_1383 | MmarC5_1583 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | PFAM: ribosomal protein L21e; KEGG: mmp:MMP0093 ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.983 |
| nac | rpl23 | MmarC5_1383 | MmarC5_0031 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.977 |
| nac | rpl24e | MmarC5_1383 | MmarC5_0965 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | LSU ribosomal protein L24E; Binds to the 23S rRNA. | 0.974 |
| nac | rpl30 | MmarC5_1383 | MmarC5_0158 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: mmp:MMP1420 LSU ribosomal protein L30P. | 0.981 |
| nac | rpl31e | MmarC5_1383 | MmarC5_1615 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | PFAM: Ribosomal protein L31e; KEGG: mmp:MMP0062 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family. | 0.976 |
| nac | rpl34e | MmarC5_1383 | MmarC5_0978 | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | PFAM: Ribosomal protein L34e; KEGG: mmp:MMP0627 ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.974 |
| rpl18 | nac | MmarC5_0160 | MmarC5_1383 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | Nascent polypeptide associated complex NAC; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. | 0.985 |
| rpl18 | rpl18a | MmarC5_0160 | MmarC5_1617 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: Ribosomal LX protein; KEGG: mmp:MMP0060 ribosomal LX protein. | 0.998 |
| rpl18 | rpl18e | MmarC5_0160 | MmarC5_0270 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: ribosomal protein L15; KEGG: mmp:MMP1323 LSU ribosomal protein L18E; Belongs to the eukaryotic ribosomal protein eL18 family. | 0.999 |
| rpl18 | rpl19e | MmarC5_0160 | MmarC5_0161 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | LSU ribosomal protein L19E; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family. | 0.999 |
| rpl18 | rpl21e | MmarC5_0160 | MmarC5_1583 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: ribosomal protein L21e; KEGG: mmp:MMP0093 ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family. | 0.999 |
| rpl18 | rpl23 | MmarC5_0160 | MmarC5_0031 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | LSU ribosomal protein L23P; Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family. | 0.999 |
| rpl18 | rpl24e | MmarC5_0160 | MmarC5_0965 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | LSU ribosomal protein L24E; Binds to the 23S rRNA. | 0.999 |
| rpl18 | rpl30 | MmarC5_0160 | MmarC5_0158 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | TIGRFAM: ribosomal protein L30P; PFAM: ribosomal protein L30; KEGG: mmp:MMP1420 LSU ribosomal protein L30P. | 0.999 |
| rpl18 | rpl31e | MmarC5_0160 | MmarC5_1615 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: Ribosomal protein L31e; KEGG: mmp:MMP0062 ribosomal protein L31e; Belongs to the eukaryotic ribosomal protein eL31 family. | 0.999 |
| rpl18 | rpl34e | MmarC5_0160 | MmarC5_0978 | LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. | PFAM: Ribosomal protein L34e; KEGG: mmp:MMP0627 ribosomal protein L34e; Belongs to the eukaryotic ribosomal protein eL34 family. | 0.999 |
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