STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Plav_2968PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rru:Rru_A1636 NADH-ubiquinone oxidoreductase, chain 4L. (139 aa)    
Predicted Functional Partners:
Plav_2970
KEGG: rru:Rru_A1638 putative multicomponent Na+-H+ antiporter subunit A.
 
 
 0.999
Plav_2971
TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: mmr:Mmar10_0886 monovalent cation/proton antiporter, MnhG/PhaG subunit.
 
 
 0.999
Plav_2972
PFAM: multiple resistance and pH regulation protein F; KEGG: rru:Rru_A1640 multiple resistance and pH regulation protein F.
 
 
 0.999
Plav_2973
PFAM: cation antiporter; KEGG: mmr:Mmar10_0884 cation antiporter.
 
 
 0.999
Plav_2969
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: rru:Rru_A1637 Na+/H+ antiporter MnhB subunit-related protein.
 
 
 0.998
Plav_2964
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rba:RB1427 putative NADH-ubiquinone oxidoreductase subunit.
 
 
 0.997
Plav_2966
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rba:RB1430 putative NADH-ubiquinone oxidoreductase subunit.
 
 
 0.997
Plav_2967
NADH dehydrogenase (quinone); PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: rba:RB1431 putative multicomponent Na+:H+ antiporter subunit D.
 
 
 0.997
Plav_3215
TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein; NADH/Ubiquinone/plastoquinone (complex I); KEGG: mlo:mll1355 NADH dehydrogenase I chain L.
  
 
 0.979
Plav_2965
Hypothetical protein.
       0.788
Your Current Organism:
Parvibaculum lavamentivorans
NCBI taxonomy Id: 402881
Other names: P. lavamentivorans DS-1, Parvibaculum lavamentivorans DS-1, Parvibaculum lavamentivorans str. DS-1, Parvibaculum lavamentivorans strain DS-1
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