STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDT21913.1Conserved hypothetical protein; Homologs of previously reported genes of unknown function. (153 aa)    
Predicted Functional Partners:
CDS92099.1
TonB-dependent receptor plug.
  
     0.623
CDS93778.1
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.600
BN1088_1430481
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.573
CDT21357.1
TonB-dependent receptor plug.
  
     0.571
CDS92100.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.570
CDT01229.1
Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.565
CDT01218.1
RagB/SusD family protein.
  
     0.561
CDS92483.1
DinB family protein.
  
     0.525
CDS93776.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
  
     0.512
CDT10521.1
Conserved hypothetical protein; Homologs of previously reported genes of unknown function.
    
 
 0.504
Your Current Organism:
Sphingobacterium sp. PM2P129
NCBI taxonomy Id: 403776
Other names: S. sp. PM2-P1-29, Sphingobacterium sp. PM2-P1-29
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.