STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0572PFAM: iron dependent repressor; FeoA family protein; KEGG: pab:PAB0714 iron-dependent repressor. (223 aa)    
Predicted Functional Partners:
Pmob_0966
Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.
  
  
 0.884
Pmob_0571
PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: tme:Tmel_1614 metal dependent phosphohydrolase.
 
     0.816
Pmob_0570
PFAM: peptidase M16 domain protein; KEGG: tpt:Tpet_1437 peptidase M16 domain protein.
     
 0.728
Pmob_0990
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: tme:Tmel_0432 ferric uptake regulator, Fur family; Belongs to the Fur family.
  
  
 0.695
Pmob_1915
Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: tte:TTE1767 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.
  
  
 0.695
Pmob_0574
PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: tme:Tmel_1527 phosphoesterase, RecJ domain protein.
 
   
 0.638
metN
ABC transporter related; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
   
   0.638
Pmob_0573
Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.
       0.628
Pmob_1670
PFAM: zinc/iron permease; KEGG: ctc:CTC01320 GufA protein.
  
  
 0.603
Pmob_0987
ABC-3 protein; PFAM: transport system permease protein; ABC-3 protein; KEGG: tme:Tmel_0435 ABC-3 protein.
  
  
 0.596
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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