STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCPFAM: Glucuronate isomerase; KEGG: tma:TM0064 uronate isomerase, putative. (455 aa)    
Predicted Functional Partners:
Pmob_0856
KEGG: oih:OB0366 hypothetical protein.
 
  
 0.987
Pmob_0233
KEGG: bad:BAD_0299 putative outer membrane protein.
  
  
  0.838
Pmob_0444
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cpe:CPE0149 D-mannonate oxidoreductase.
 
  
 0.798
Pmob_0855
PFAM: ROK family protein; KEGG: bha:BH1094 transcriptional repressor of the xylose operon.
     
 0.671
Pmob_0853
Alpha-glucosidase; PFAM: glycoside hydrolase family 4; KEGG: tma:TM1068 alpha-glucosidase, putative.
 
     0.612
plsY
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
       0.437
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.