STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pmob_0923Monosaccharide-transporting ATPase; PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: tpt:Tpet_1794 monosaccharide-transporting ATPase. (289 aa)    
Predicted Functional Partners:
Pmob_0922
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: tpt:Tpet_1793 monosaccharide-transporting ATPase; Belongs to the binding-protein-dependent transport system permease family.
 0.999
Pmob_1602
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: mlo:mlr3338 permease protein, sugar ABC transporter (ribose); Belongs to the binding-protein-dependent transport system permease family.
 0.997
Pmob_0638
Monosaccharide-transporting ATPase; PFAM: inner-membrane translocator; KEGG: gtn:GTNG_0834 methylthioribose transport system permease protein.
 
 0.988
Pmob_0921
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tpt:Tpet_1792 ABC transporter related.
 0.972
rbsD
RbsD or FucU transport; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.970
Pmob_0869
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: sde:Sde_0264 signal transduction histidine kinase-like.
 
  
 
 0.953
Pmob_0876
Histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: tpt:Tpet_1137 PAS/PAC sensor signal transduction histidine kinase.
 
  
 
 0.953
Pmob_1601
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: tma:TM0956 D-ribose transport system ATP-binding protein.
 0.948
Pmob_1600
PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: smd:Smed_3227 periplasmic binding protein/LacI transcriptional regulator.
  
  
 
0.924
Pmob_0850
Integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; KEGG: mta:Moth_1477 periplasmic sensor signal transduction histidine kinase.
 
 
  
 0.898
Your Current Organism:
Petrotoga mobilis
NCBI taxonomy Id: 403833
Other names: P. mobilis SJ95, Petrotoga mobilis DSM 10674, Petrotoga mobilis SJ95, Petrotoga mobilis str. SJ95, Petrotoga mobilis strain SJ95
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